STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trbB1Conjugal transfer protein trbB. (327 aa)    
Predicted Functional Partners:
trbC1
Putative conjugal transfer protein; TrbC.
  
 0.949
trbE1
Conjugal transfer protein trbE.
 
  
 0.945
trbD
Conjugal transfer protein trbD.
 
  
 0.934
trbG1
Probable conjugal transfer protein trbG.
 
  
 0.926
trbI1
Possible trbI, a component on a type IV secretion system (Y10832).
 
  
 0.923
trbF1
Putative conjugal transfer protein trbF.
 
  
 0.917
trbJ
Putative conjugal transfer protein trbJ.
 
  
 0.911
RPA3682
Conserved unknown protein; COGs COG2064.
 
  
 0.902
trbL
Putative CONJUGAL TRANSFER protein trbL.
 
  
 0.899
RPA3683
Conserved hypothetical protein; COGs COG2064.
 
  
 0.871
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.