STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2240Possible replication protein A. (300 aa)    
Predicted Functional Partners:
RPA2239
Putative partition protein.
   
 0.932
RPA2238
Conserved hypothetical protein.
 
     0.862
RPA2236
Conserved hypothetical protein.
 
     0.801
RPA4131
Helix-turn-helix protein, CopG family.
 
     0.771
RPA2234
Conserved hypothetical protein.
 
     0.768
RPA2242
Conserved hypothetical protein.
 
     0.744
trbJ
Putative conjugal transfer protein trbJ.
  
    0.741
RPA4120
Possible conjugal transfer protein trbJ.
  
     0.735
RPA4133
Conserved hypothetical protein.
 
     0.730
traG1
Plasmid transfer factor, traG.
 
     0.727
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.