close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2242Conserved hypothetical protein. (86 aa)    
Predicted Functional Partners:
RPA2241
Conserved hypothetical protein.
 
    0.862
RPA2238
Conserved hypothetical protein.
 
    0.781
RPA2244
Conserved hypothetical protein.
 
    0.778
RPA2248
Conserved hypothetical protein.
  
    0.770
RPA2236
Conserved hypothetical protein.
 
    0.769
RPA2223
Conserved hypothetical protein.
  
    0.763
RPA2245
Hypothetical protein.
  
    0.763
RPA2247
Conserved hypothetical protein; InterPro IPR001687.
  
     0.763
trbJ
Putative conjugal transfer protein trbJ.
  
    0.757
RPA4120
Possible conjugal transfer protein trbJ.
  
    0.756
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.