STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2248Conserved hypothetical protein. (354 aa)    
Predicted Functional Partners:
RPA2247
Conserved hypothetical protein; InterPro IPR001687.
 
     0.956
RPA2249
Putative methylase/helicase.
     0.951
RPA2251
Putative plasmid stabilization protein.
 
     0.912
RPA2245
Hypothetical protein.
 
     0.775
RPA2242
Conserved hypothetical protein.
  
     0.769
RPA2244
Conserved hypothetical protein.
  
     0.758
RPA4133
Conserved hypothetical protein.
  
     0.756
RPA2252
Putative ardC antirestriction protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.748
RPA2236
Conserved hypothetical protein.
  
    0.744
RPA2238
Conserved hypothetical protein.
  
     0.742
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.