STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2252Putative ardC antirestriction protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (314 aa)    
Predicted Functional Partners:
RPA2249
Putative methylase/helicase.
     0.979
RPA2251
Putative plasmid stabilization protein.
 
    0.829
RPA2247
Conserved hypothetical protein; InterPro IPR001687.
 
    0.768
RPA2248
Conserved hypothetical protein.
 
     0.748
RPA2253
Hypothetical protein.
  
    0.556
RPA2244
Conserved hypothetical protein.
 
    0.529
RPA2250
Hypothetical protein.
  
    0.524
RPA2242
Conserved hypothetical protein.
  
     0.519
traG1
Plasmid transfer factor, traG.
 
    0.491
RPA2217
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.486
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.