Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2297Conserved unknown protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. (935 aa)    
Predicted Functional Partners:
RPA3913
Conserved hypothetical protein.
 
  
 0.969
RPA2298
Hypothetical protein.
 
  
 0.952
RPA3888
Possible flagellar basal-body rod protein FlgB.
 
 
 0.940
flgK2
Possible flagellar hook-associated protein 1 FlgK; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.936
fliD
Possible flagellar hook-associated protein 2 (FliD, filament cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
 
 0.928
RPA0642
Conserved hypothetical protein.
  
 
 0.925
RPA3929
Conserved unknown protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
0.905
RPA3932
Probable flagellar hook protein flgE; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.903
RPA3915
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 
0.901
fliC
Putative flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
     
  0.900
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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