Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2316enoyl-CoA hydratase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (261 aa)    
Predicted Functional Partners:
hbdA
3-hydroxybutyryl-CoA dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.885
gctB
Putative CoA transferase, small subunit B.
  
 0.811
RPA3462
Thiolase.
  
 0.802
RPA1756
Possible acetyl-CoA acetyltransferase.
 
 0.783
gctA
Possible glutaconate CoA-transferase, subunit A.
  
  
 0.757
RPA1206
Aldehyde dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the aldehyde dehydrogenase family.
   
 0.731
RPA2153
Aldehyde dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
 0.731
RPA1687
Putative aldehyde dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the aldehyde dehydrogenase family.
   
 0.728
pcaF
Putative acetyl-CoA acetyltransferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.632
RPA0531
Beta-ketothiolase, acetoacetyl-CoA thiolase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.632
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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