Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2319Uncharacterized protein family UPF0065; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (330 aa)    
Predicted Functional Partners:
RPA2320
Possible TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family.
  
 0.954
RPA2321
Possible TctB subunit of the Tripartite Tricarboxylate Transporter(TTT) Family.
 
  
 0.946
RPA3495
Possible TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family.
  
 0.896
RPA3496
Possible TctB subunit of the Tripartite Tricarboxylate Transport(TTT) Family.
 
  
 0.807
gctB
Putative CoA transferase, small subunit B.
  
    0.770
gctA
Possible glutaconate CoA-transferase, subunit A.
  
    0.566
FldA
Conserved unknown protein; COGs COG2828.
 
  
 0.500
RPA2316
enoyl-CoA hydratase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.488
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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