STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2330Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (552 aa)    
Predicted Functional Partners:
RPA2329
Putative ABC transporter permease protein.
  
 0.994
RPA2644
Putative ABC transporter permease protein.
  
 0.978
oppC
Putative ABC transporter permease protein.
  
 0.976
RPA1215
Putative ABC transporter, permease protein.
  
 0.965
RPA1471
Putative dipeptide ABC transporter (permease).
  
 0.965
RPA1448
Putative oligopeptide ABC transporter (permease).
  
 0.953
RPA0759
Putative oligopeptide ABC transporter, permease component.
  
 0.945
RPA2328
Putative ABC transporter permease protein.
  
 0.934
RPA2327
Putative ABC transporter oligopeptide-binding protein.
  
 0.834
RPA3689
Peptide ABC transporter, permease protein.
    0.821
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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