Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2344Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (206 aa)    
Predicted Functional Partners:
RPA2345
Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.805
RPA2347
Possible vanadium nitrogenase associated protein N (U51863).
 
    0.577
RPA2346
Hypothetical protein; InterPro IPR006311.
 
   
 0.572
RPA2348
Possible nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase).
 
    0.566
bchE
Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.501
RPA0696
Possible transcriptional regulator, GntR family.
  
  
 0.490
bchJ
Putative 4-vinyl protochlorophyllide reductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.467
RPA1503
Hypothetical protein; InterPro IPR000379 COGs COG2267.
  
   
 0.466
RPA2170
Hypothetical protein; InterPro IPR007113.
  
     0.457
cobB-2
Sir2 family, possible ADP ribosyltransferase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
  
    0.423
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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