STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metN2ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (377 aa)    
Predicted Functional Partners:
RPA2359
Putative periplasmic protein; Belongs to the nlpA lipoprotein family.
 0.999
RPA2361
Putative ABC transporter, permease protein.
 0.999
RPA1427
Putative ABC transporter, permease protein.
 0.998
RPA1428
Possible lipoprotein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 0.993
RPA1430
Putative outer membrane protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 0.993
metN1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
  
 
 
0.907
RPA2362
Putative O-acetylhomoserine sulfhydrylase.
  
    0.725
metAS
Possible homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.
  
  
 0.701
RPA2329
Putative ABC transporter permease protein.
 
  
 0.669
metF
Putative 5,10-methylenetetrahydrofolate reductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the methylenetetrahydrofolate reductase family.
   
  
 0.646
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.