STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2385Putative ABC transporter, periplasmic Fe+3 siderophore binding protein. (301 aa)    
Predicted Functional Partners:
RPA2382
Putative iron(III) ABC transporter, ATP-binding protein.
 
  
 0.994
RPA2383
Putative iron(III) ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.994
RPA2384
Putative ironIII transport permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.994
RPA2389
Possible Rhizobactin siderophore biosynthesis protein RhsF; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.808
RPA2387
Conserved hypothetical protein.
  
  
 0.798
RPA2386
Conserved hypothetical protein.
  
    0.791
RPA2388
Possible acyl-CoA ligase for activation during siderophore synthesis; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.786
RPA2390
Possible Rhizobactin siderophore biosynthesis protein rhbC.
  
  
 0.739
RPA2380
Probable tonB dependent iron siderophore receptor.
 
  
 0.719
RPA2377
Conserved hypothetical protein.
 
    0.562
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.