Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RPA2398Iron siderophore uptake receptor family, probable Mg/Co uptake. (797 aa)    
Predicted Functional Partners:
RPA2400
Conserved hypothetical protein; COGs COG0811.
  
  
 0.814
RPA2399
CobN/Magnesium chelatase family.
  
    0.778
RPA2401
Conserved unknown protein.
  
    0.778
RPA2378
Putative tonB-dependent receptor protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.639
RPA1335
Probable FecR, iron siderophore sensor protein.
 
  
 0.633
RPA3281
Probable FecR, iron siderophore sensor protein.
 
  
 0.627
RPA4430
Putative TonB-dependent receptor.
 
  
 0.627
PA0781
Putative outer membrane hemin/siderophore receptor protein.
  
   
 0.612
RPA2745
Possible ferric siderophore receptor protein.
 
  
 0.607
fecR4
Probable FecR, iron siderophore sensor protein.
 
  
 0.606
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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