STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
RPA2452Putative penicillin-binding protein 1A; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (832 aa)    
Predicted Functional Partners:
RPA3536
Putative penicillin-binding protein.
 
 
 0.983
RPA1867
Putative penicillin-binding protein.
 
 
0.943
mtgA
Possible peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
 
0.942
RPA0577
Possible penicillin-binding protein.
 
 
0.939
RPA2774
Penicillin binding protein; Belongs to the peptidase S11 family.
  
  
 0.926
RPA2554
Penicillin binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
0.925
RPA2451
Putative N-acetylmuramoyl-L-alanine amidase.
 
   
 0.800
ftsW
Putative cell division protein ftsW; Belongs to the SEDS family.
  
  
 0.758
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
   
 0.746
RPA2455
Peptidase M23/M37.
 
   
 0.701
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.