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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2542Possible TrapT family, dctQ subunit, C4-dicarboxylate transport. (183 aa)    
Predicted Functional Partners:
RPA2541
TrapT family, dctM subunit, C4-dicarboxylate transport.
 
 0.982
RPA2543
TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.975
dctQ2
TrapT dctQ-M fusion permease, dicarboxylate transport.
 
 0.960
RPA1783
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport.
   
 
  0.925
RPA4555
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport.
  
 
  0.914
dctQ1
Possible TrapT family, dctQ subunit, C4-dicarboxylate transport.
  
  
 0.912
RPA1977
Possible TrapT family, dctQ subunit, glutamate transport; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
 
  0.900
MLYCD,
malonyl-CoA decarboxylase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.824
RPA1784
TrapT family, dctM subunit, C4-dicarboxylate transport.
 
 0.669
RPA4556
Possible TrapT family, dctP subunit, C4-dicarboxylate periplasmic binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.621
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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