STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2571Possible NADPH-dependent oxidoreductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (437 aa)    
Predicted Functional Partners:
RPA2570
Conserved hypothetical protein; COGs COG3496.
  
 0.999
cfa1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.997
cfa2
Cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.990
ChrR
Sensor protein ChrR, cytochrome cycA regulator.
 
  
 0.952
RPA0924
Possible cyclopropane-fatty-acyl-phospholipid synthase.
  
 0.942
RPA0923
Conserved hypothetical protein; InterPro IPR001104.
    0.927
coxG
Possible cytochrome-c oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
      0.821
RPA3198
Conserved hypothetical protein; InterPro IPR001104.
 
    0.771
RPA2990
Conserved hypothetical protein.
 
  
 0.745
RPA3179
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
 
  
 0.585
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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