| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RPA2596 | RPA3085 | RPA2596 | RPA3085 | D-alanine aminotransferase. | Putative alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.933 |
| RPA2596 | RPA3756 | RPA2596 | RPA3756 | D-alanine aminotransferase. | Malate dehydrogenase-like protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the LDH2/MDH2 oxidoreductase family. | 0.917 |
| RPA2596 | RPA3774 | RPA2596 | RPA3774 | D-alanine aminotransferase. | Possible D-amino-acid dehydrogenase. | 0.905 |
| RPA2596 | aatA | RPA2596 | RPA4331 | D-alanine aminotransferase. | Aspartate aminotransferase A; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.920 |
| RPA2596 | ddlA | RPA2596 | RPA3525 | D-alanine aminotransferase. | Putative D-alanyl-D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.913 |
| RPA2596 | hisC | RPA2596 | RPA4439 | D-alanine aminotransferase. | Putative histidinol-phosphate aminotransferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.937 |
| RPA2596 | hpd | RPA2596 | RPA0005 | D-alanine aminotransferase. | 4-hydroxyphenylpyruvate dioxygenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.905 |
| RPA2596 | ntrX | RPA2596 | RPA2595 | D-alanine aminotransferase. | Nitrogen assimilation regulatory protein ntrX-Response regulator; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.794 |
| RPA2596 | ntrY | RPA2596 | RPA2594 | D-alanine aminotransferase. | Nitrogen regulatory signal transduction histidine kinase NtrY; Citation: Pawlowski et al. (1991) Mol. Gen. Genet. 231:124-38; observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.781 |
| RPA2596 | putA | RPA2596 | RPA1580 | D-alanine aminotransferase. | Proline dehydrogenase PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.925 |
| RPA3085 | RPA2596 | RPA3085 | RPA2596 | Putative alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | D-alanine aminotransferase. | 0.933 |
| RPA3085 | RPA3774 | RPA3085 | RPA3774 | Putative alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Possible D-amino-acid dehydrogenase. | 0.541 |
| RPA3085 | ddlA | RPA3085 | RPA3525 | Putative alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Putative D-alanyl-D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.962 |
| RPA3085 | putA | RPA3085 | RPA1580 | Putative alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Proline dehydrogenase PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.889 |
| RPA3756 | RPA2596 | RPA3756 | RPA2596 | Malate dehydrogenase-like protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the LDH2/MDH2 oxidoreductase family. | D-alanine aminotransferase. | 0.917 |
| RPA3756 | aatA | RPA3756 | RPA4331 | Malate dehydrogenase-like protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the LDH2/MDH2 oxidoreductase family. | Aspartate aminotransferase A; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.906 |
| RPA3756 | hisC | RPA3756 | RPA4439 | Malate dehydrogenase-like protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the LDH2/MDH2 oxidoreductase family. | Putative histidinol-phosphate aminotransferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.900 |
| RPA3756 | hpd | RPA3756 | RPA0005 | Malate dehydrogenase-like protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the LDH2/MDH2 oxidoreductase family. | 4-hydroxyphenylpyruvate dioxygenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.907 |
| RPA3774 | RPA2596 | RPA3774 | RPA2596 | Possible D-amino-acid dehydrogenase. | D-alanine aminotransferase. | 0.905 |
| RPA3774 | RPA3085 | RPA3774 | RPA3085 | Possible D-amino-acid dehydrogenase. | Putative alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.541 |