Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2633Putative ATP-binding protein of ABC transporter, possibly for nitrate. (270 aa)    
Predicted Functional Partners:
RPA2632
ABC transport permease protein, possibly for nitrate.
 
 0.994
RPA2611
Putative aliphatic sulfonate transport membrane component. Permease subunit of an ABC transporter; Citation: Van Der Ploeg et al. (1999) J. Biol. Chem. 274:29358-29365.
 0.973
RPA1363
Sulfate ester transport system permease protein.
 
 0.972
RPA2623
Possible sulfonate transport system permease protein. Subunit of an ABC transporter.
 0.972
RPA2631
Possible ABC transport substrate-binding periplasmic protein.
 
 
 0.961
RPA0882
ABC transporter, permease.
 
 0.954
RPA2042
Putative ABC transporter, permease protein.
 0.948
RPA4162
Putative taurine ABC transport system permease protein.
 
 0.885
RPA2678
Putative permease protein, subunit of ABC transporter.
 
 0.875
RPA3383
Possible taurine transport system permease protein.
 
 
 0.853
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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