STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2633Putative ATP-binding protein of ABC transporter, possibly for nitrate. (270 aa)    
Predicted Functional Partners:
RPA2632
ABC transport permease protein, possibly for nitrate.
 
  
 0.969
RPA2631
Possible ABC transport substrate-binding periplasmic protein.
 
  
 0.953
RPA4162
Putative taurine ABC transport system permease protein.
  
 0.860
RPA2678
Putative permease protein, subunit of ABC transporter.
  
 0.848
RPA2611
Putative aliphatic sulfonate transport membrane component. Permease subunit of an ABC transporter; Citation: Van Der Ploeg et al. (1999) J. Biol. Chem. 274:29358-29365.
  
 0.846
RPA1363
Sulfate ester transport system permease protein.
 
  
 0.837
RPA2623
Possible sulfonate transport system permease protein. Subunit of an ABC transporter.
  
 0.837
cysT
Putative sulfate ABC transporter, permease component; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    0.836
RPA3383
Possible taurine transport system permease protein.
  
 0.822
nrtA
Putative nitrate transporter component, nrtA; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.797
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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