STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2641Putative ABC transporter oligopeptide-binding protein. (533 aa)    
Predicted Functional Partners:
RPA2646
Putative ABC transporter oligopeptide-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 
0.903
RPA2644
Putative ABC transporter permease protein.
 
 0.899
RPA2645
Putative ABC transporter permease protein.
 
 0.894
RPA2639
Probable L-2-amino-thiazoline-4-carboxylic acid hydrolase.
 
     0.879
RPA2329
Putative ABC transporter permease protein.
 
 0.852
RPA2328
Putative ABC transporter permease protein.
 
 0.834
oppC
Putative ABC transporter permease protein.
 
 0.812
RPA2640
Isochorismatase hydrolase family.
  
  
 0.781
oppB
Putative dipeptide transport system permease protein 1.
 
 0.778
RPA4721
possible+E2677 pyruvate-flavodoxin oxidoreductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.776
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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