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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2644Putative ABC transporter permease protein. (276 aa)    
Predicted Functional Partners:
RPA2643
Putative ABC transporter ATP-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the ABC transporter superfamily.
 
 0.996
oppD
Putative oligopeptide ABC transporter (ATP-binding protein); Belongs to the ABC transporter superfamily.
 
 0.990
RPA1444
Putative oligopeptide binding protein precursor; Belongs to the ABC transporter superfamily.
 
 0.990
RPA0755
Putative oligopeptide ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
 0.989
RPA1445
Putative oligopeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.987
oppF
Oligopeptide ABC transporter (ATP-binding protein); Belongs to the ABC transporter superfamily.
 
 0.986
RPA2330
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.984
RPA1214
Putative ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.982
RPA2645
Putative ABC transporter permease protein.
 
 0.982
RPA3688
Peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.963
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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