Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2676Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (304 aa)    
Predicted Functional Partners:
RPA3796
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.764
RPA2222
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.763
RPA3387
Transcriptional regulator, LysR family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the LysR transcriptional regulatory family.
  
     0.717
RPA4747
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.665
RPA3738
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.652
RPA1562
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.590
RPA1721
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.588
RPA2680
Conserved hypothetical protein; InterPro IPR000379:IPR000734 COGs COG0657.
     
 0.548
RPA2677
Putative substrate-binding protein, subunit of ABC transporter.
     
 0.544
RPA2678
Putative permease protein, subunit of ABC transporter.
       0.544
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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