STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2678Putative permease protein, subunit of ABC transporter. (294 aa)    
Predicted Functional Partners:
RPA2679
Putative transport system ATP-binding protein.
  
 0.971
RPA2677
Putative substrate-binding protein, subunit of ABC transporter.
 
  
 0.967
RPA1364
Sulfate ester transport system ATP-binding protein.
  
 0.864
RPA4163
Putative taurine transport system ATP-binding protein.
  
 0.859
RPA0883
ABC transporter, ATP-binding protein.
  
 0.857
RPA2497
Putative anion ABC transporter, ATP-binding protein.
  
 0.849
RPA2633
Putative ATP-binding protein of ABC transporter, possibly for nitrate.
  
 0.848
RPA2622
Putative sulfonate transport system, ATP-binding protein. Subunit of ABC transporter; Citation: Beil et al. (1995) Eur. J. Biochem. 229:385-394.
  
 0.846
nrtC1
Putative nitrate transport system ATP-binding protein.
  
 0.839
RPA2041
ABC-transport protein, ATP-binding protein.
  
 0.818
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (24%) [HD]