STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2679Putative transport system ATP-binding protein. (272 aa)    
Predicted Functional Partners:
RPA2678
Putative permease protein, subunit of ABC transporter.
  
 0.971
RPA1363
Sulfate ester transport system permease protein.
 
 0.969
RPA2623
Possible sulfonate transport system permease protein. Subunit of an ABC transporter.
 
 0.967
RPA2611
Putative aliphatic sulfonate transport membrane component. Permease subunit of an ABC transporter; Citation: Van Der Ploeg et al. (1999) J. Biol. Chem. 274:29358-29365.
 
 0.959
RPA2677
Putative substrate-binding protein, subunit of ABC transporter.
 
  
 0.935
msuD
Methanesulfonate sulfonatase MsuD (monooxygenase); Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.
 
 
 0.932
RPA3707
Possible nitrate transporter component, nrtA.
  
 0.908
nosF
Putative NosF protein (an ABC transporter).
 
    
0.904
RPA1362
Putative sulfate ester transport system substrate-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.892
RPA2608
Possible sulfonate binding protein.
 
 0.891
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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