Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RPA2745Possible ferric siderophore receptor protein. (764 aa)    
Predicted Functional Partners:
RPA3338
Possible Condensation domain, peptide synthetase.
  
  
 0.800
RPA1875
Possible uncharacterized iron-regulated membrane protein.
 
  
 0.786
RPA3413
Uncharacterized iron-regulated membrane protein DUF337.
 
  
 0.786
RPA1848
Uncharacterized iron-regulated membrane protein DUF337.
 
  
 0.765
RPA3479
2OG-Fe(II) oxygenase superfamily:Prolyl 4-hydroxylase, alpha subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.722
RPA1340
Probable FecR, iron siderophore sensor protein.
 
  
 0.670
fecR3
Probable FecR, iron siderophore sensor protein.
 
  
 0.669
RPA1335
Probable FecR, iron siderophore sensor protein.
 
  
 0.663
RPA1338
Conserved hypothetical protein.
 
   
 0.655
RPA1334
RNA polymerase ECF-type sigma factor, possible FecI; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.654
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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