Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2773Epoxide hydrolase. (316 aa)    
Predicted Functional Partners:
RPA3549
Possible hydrolase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.926
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.546
RPA4584
Possible endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
      
 0.543
RPA2776
Probable DNA polymerase III, delta prime subunit.
  
    0.542
RPA2774
Penicillin binding protein; Belongs to the peptidase S11 family.
  
    0.532
hpcG
2-oxo-hepta-3-ene-1,7-dioate hydratase.
  
  
 0.435
RPA3513
Phytoene dehydrogenase-related protein.
  
  
 0.418
RPA2778
Possible deoxyribonuclease.
  
    0.417
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
     
 0.413
RPA1511
Alpha/beta hydrolase fold.
  
     0.412
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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