Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
tatBPossible sec-independent protein secretion pathway component TatB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (169 aa)    
Predicted Functional Partners:
tatC
Putative sec-independent protein translocase component TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
  
 0.998
tatAE
Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
 0.995
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.906
RPA3417
Lipocalin-related protein and Bos/Can/Equ allergen:Rhomboid-like protein.
   
 
 0.744
opgG
Periplasmic glucans biosynthesis protein OpgG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
    
 
 0.733
RPA2261
GMP synthetase: N-terminal fragment.
  
    0.659
RPA2851
DUF173; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
 
     0.541
RPA2964
Multicopper oxidase, type 1.
   
 
 0.536
nirK1
Nitrite reductase, major outer membrane copper-containing protein; Belongs to the multicopper oxidase family.
   
 
 0.536
nirK2
Dissimilatory nitrite reductase; Belongs to the multicopper oxidase family.
   
 
 0.536
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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