Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RPA0123 | tatB | RPA0123 | RPA2848 | Possible KTN NAD-binding domain involved with K+ transport. | Possible sec-independent protein secretion pathway component TatB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.480 |
| RPA2261 | tatAE | RPA2261 | RPA2849 | GMP synthetase: N-terminal fragment. | Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.451 |
| RPA2261 | tatB | RPA2261 | RPA2848 | GMP synthetase: N-terminal fragment. | Possible sec-independent protein secretion pathway component TatB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.617 |
| RPA2846 | tatB | RPA2846 | RPA2848 | Conserved hypothetical protein. | Possible sec-independent protein secretion pathway component TatB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.485 |
| RPA2846 | tatC | RPA2846 | RPA2847 | Conserved hypothetical protein. | Putative sec-independent protein translocase component TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.499 |
| RPA2851 | rnpA | RPA2851 | RPA0633 | DUF173; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.402 |
| RPA2851 | tatAE | RPA2851 | RPA2849 | DUF173; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.525 |
| RPA2851 | tatB | RPA2851 | RPA2848 | DUF173; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Possible sec-independent protein secretion pathway component TatB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.473 |
| RPA3417 | tatAE | RPA3417 | RPA2849 | Lipocalin-related protein and Bos/Can/Equ allergen:Rhomboid-like protein. | Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.876 |
| RPA3417 | tatB | RPA3417 | RPA2848 | Lipocalin-related protein and Bos/Can/Equ allergen:Rhomboid-like protein. | Possible sec-independent protein secretion pathway component TatB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.747 |
| guaA | tatAE | RPA2203 | RPA2849 | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.877 |
| guaA | tatB | RPA2203 | RPA2848 | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | Possible sec-independent protein secretion pathway component TatB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.878 |
| guaA | tatC | RPA2203 | RPA2847 | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | Putative sec-independent protein translocase component TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.422 |
| rnpA | RPA2851 | RPA0633 | RPA2851 | Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | DUF173; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.402 |
| rnpA | tatB | RPA0633 | RPA2848 | Probable ribonuclease p protein component (protein c5); RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | Possible sec-independent protein secretion pathway component TatB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.475 |
| tatAE | RPA2261 | RPA2849 | RPA2261 | Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | GMP synthetase: N-terminal fragment. | 0.451 |
| tatAE | RPA2851 | RPA2849 | RPA2851 | Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | DUF173; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.525 |
| tatAE | RPA3417 | RPA2849 | RPA3417 | Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Lipocalin-related protein and Bos/Can/Equ allergen:Rhomboid-like protein. | 0.876 |
| tatAE | guaA | RPA2849 | RPA2203 | Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.877 |
| tatAE | tatB | RPA2849 | RPA2848 | Putative sec-independent protein translocase protein tatA/E; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Possible sec-independent protein secretion pathway component TatB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. | 0.991 |
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