Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA2857Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (349 aa)    
Predicted Functional Partners:
RPA2858
Hypothetical protein; InterPro IPR006202.
       0.865
cheA2
Multidomain chemotaxis histidine kinase CheA2 (Hpt, CheA, CheW, & Resp. Reg. Rec. domains); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.777
cheA3
Multidomain chemotaxis histidine kinase CheA3 (Hpt, CheA, CheW, & Resp. Reg. Rec. domains); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.777
RPA3316
Possible chemotaxis cheB/cheR fusion protein.
  
 
 0.543
cheW1-3
Chemotaxis signal transduction/oligomerization protein CheW1-2.
  
 
 0.512
cheW1-1
Chemotaxis signal transduction/oligomerization protein CheW1-1.
  
 
 0.512
cheW2
Chemotaxis signal transduction/oligomerization protein CheW2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.512
cheW3
Chemotaxis signal transduction/oligomerization protein CheW3; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.512
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
 
 
 0.485
RPA2009
Possible chemotaxis protein motA.
 
  
 0.463
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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