Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yrkNGCN5-related N-acetyltransferase. (192 aa)    
Predicted Functional Partners:
gpdA
Putative glycerol-3-phosphate dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
   0.668
RPA2989
Putative quinone oxidoreductase.
       0.639
RPA2492
Conserved hypothetical protein; InterPro IPR000051:IPR001601 COGs COG0500.
      0.569
phoU
Phosphate regulon transcriptional regulator, phoU; Plays a role in the regulation of phosphate uptake.
   
    0.550
RPA2987
Conserved hypothetical protein; InterPro IPR000379 COGs COG0657.
       0.543
RPA4290
Conserved hypothetical protein; Belongs to the PsiE family.
 
  
 0.515
RPA2929
Conserved hypothetical protein.
  
     0.416
RPA1689
Conserved hypothetical protein.
  
     0.410
RPA3560
DUF81.
 
     0.407
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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