STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA2992Conserved hypothetical protein. (227 aa)    
Predicted Functional Partners:
RPA2993
Domain of unknown function UPF0126.
  
    0.684
RPA3646
Putative maltooligosyltrehalose trehalohydrolase.
  
  
 0.550
RPA3311
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 13 family.
  
  
 0.506
RPA3643
Putative trehalose synthase.
  
    0.495
glgA1
Putative glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.488
RPA2994
Transcriptional regulator, LysR family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the LysR transcriptional regulatory family.
  
    0.444
glgX
Probable glycosyl hydrolase; Belongs to the glycosyl hydrolase 13 family.
   
  
 0.425
RPA2991
Hypothetical protein.
  
    0.418
RPA4662
Putative suar transport protein.
  
    0.417
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.