Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phyB2Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB2. (775 aa)    
Predicted Functional Partners:
rphyB
Response regulator receiver (CheY-like protein).
 
   
 0.987
phyB1
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB1.
 
  
0.979
RPA3018
Response regulator receiver:histidine kinase.
 
 0.967
phyB3
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB3; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 
0.918
RPA2787
Putative signal transduction histidine kinase with PAS/PAC domain.
     0.894
RPA3014
Two-component transcriptional regulator, LuxR family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
   
 0.870
RPA3316
Possible chemotaxis cheB/cheR fusion protein.
   
 0.852
RPA0754
Putative signal transduction histidine kinase with PAS/PAC domains.
  
 0.834
RPA2076
Putative signal transduction histidine kinase.
     0.833
RPA4513
Putative signal transduction histidine kinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
     0.823
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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