Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rphyBResponse regulator receiver (CheY-like protein). (154 aa)    
Predicted Functional Partners:
RPA3018
Response regulator receiver:histidine kinase.
 
 
 0.991
phyB2
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB2.
 
   
 0.987
phyB1
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB1.
 
   
 0.982
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
 
 
 0.928
RPA1681
Sensor histidine kinase with a response regulator receiver domain.
 
 
 0.905
RPA3014
Two-component transcriptional regulator, LuxR family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
   
 0.866
RPA2434
Sensor histidine kinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.731
RPA1558
Sensor histidine kinase with multiple PAS/PAC and a response regulator receiver domain.
 
 
 0.727
RPA2075
Putative signal transduction histidine kinase with GAF and PAS/PAC domains.
 
 
 0.682
phyB3
Bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB3; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
     0.668
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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