STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfa2Cyclopropane-fatty-acyl-phospholipid synthase. (416 aa)    
Predicted Functional Partners:
RPA2571
Possible NADPH-dependent oxidoreductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.990
RPA2570
Conserved hypothetical protein; COGs COG3496.
  
 0.989
ChrR
Sensor protein ChrR, cytochrome cycA regulator.
  
  
 0.759
RPA0923
Conserved hypothetical protein; InterPro IPR001104.
    0.615
RPA0924
Possible cyclopropane-fatty-acyl-phospholipid synthase.
  
  
0.502
RPA3081
Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
       0.459
cfa1
Cyclopropane-fatty-acyl-phospholipid synthase.
  
   
0.423
mcyE
Possible McyE polykeitde synthase and peptide synthetase (AF183408).
  
  
 0.410
otsA
Putative alpha,alpha-trehalose-phosphate synthase (UDP-forming) (trehalose-6-phosphate synthase); Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
  
    0.405
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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