STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RPA3100Uncharacterized protein family UPF0065; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (334 aa)    
Predicted Functional Partners:
RPA2320
Possible TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family.
 
  
 0.895
RPA3495
Possible TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family.
 
  
 0.895
RPA2321
Possible TctB subunit of the Tripartite Tricarboxylate Transporter(TTT) Family.
 
  
 0.873
RPA3496
Possible TctB subunit of the Tripartite Tricarboxylate Transport(TTT) Family.
 
  
 0.802
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
       0.530
RPA3099
Conserved hypothetical protein; InterPro IPR001092.
       0.530
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.