Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3133Response regulator receiver (CheY-like protein). (121 aa)    
Predicted Functional Partners:
RPA1858
Sensor histidine kinase with a PAS domain.
 
 0.997
RPA1972
Sensor histidine kinase.
 
 0.996
RPA1938
Sensor histidine kinase, possible pleC.
 
 0.994
RPA4140
Sensor histidine kinase with a PAS domain.
 
 
 0.977
RPA3132
Putative diguanylate cyclase (GGDEF) with response regulator receiver domain.
 
 
0.905
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
 
0.903
RPA4753
Histidine kinase with a response regulator receiver domain.
 
  
0.873
RPA0079
Sensor histidine kinase with multiple PAS domains.
 
 
 0.864
phoR
Two component sensor histidine kinase phoR.
 
 
 0.862
RPA4790
Response regulator receiver:histidine kinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.781
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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