Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3175propionyl-CoA carboxylase precursor, biotin carrier protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (671 aa)    
Predicted Functional Partners:
pccB
propionyl-CoA carboxylase beta chain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 0.998
RPA3455
Possible methylmalonyl-CoA decarboxylase alpha chain.
 
 0.981
RPA1450
Putative pyruvate carboxylase.
 
0.963
RPA2143
Putative acetyl/propionyl-CoA carboxylase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.954
uahA
Urea amidolyase-related.
 
 
 0.936
RPA2538
Putative acyl-CoA carboxylase, beta chain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.925
RPA1703
Putative acetyl-CoA acyltransferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.924
pimB
acetyl-CoA acetyltransferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.924
pta
Putative phosphate acetyltransferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.924
RPA2305
acyl-CoA dehydrogenase.
  
 0.921
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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