STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA3176Hypothetical protein; InterPro IPR002591. (616 aa)    
Predicted Functional Partners:
RPA0136
Methyl-accepting chemotaxis receptor/sensory transducer; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.755
RPA4226
Putative signal transduction histidine kinase with Chase domain.
  
     0.755
RPA3266
Possible pyridine nucleotide-disulphide oxidored.
  
    0.748
RPA3206
Conserved hypothetical protein; InterPro IPR000104.
  
    0.740
RPA3958
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.718
RPA3187
Sensor histidine kinase with a PAS/PAC domain.
  
   0.714
fkbM
Possible methyltransferase, FkbM family.
  
    0.699
RPA1598
Peptidylprolyl isomerase, FKBP-type:Acyltransferase 3 family.
  
    0.693
RPA3502
Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
    0.687
RPA3873
Hypothetical protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
  
    0.643
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.