Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3291Possible membrane transport protein. (553 aa)    
Predicted Functional Partners:
RPA1405
Putative urea amidolyase.
  
  
 0.746
mntH
Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
  
     0.697
nxiA,
Putative high-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
   
 0.657
RPA0859
ABC transporter, permease protein.
  
  
 0.488
RPA1747
Conserved hypothetical protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the D-glutamate cyclase family.
  
  
 0.465
pxpA
Possible lactam utilization protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
  
 0.464
RPA1259
Putative cation-transporting P-type ATPase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
 0.447
RPA2893
Putative cation-transporting ATPase.
   
 0.447
RPA3292
Hypothetical protein.
       0.440
dur1
DUF213; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.403
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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