STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3293Putative branched-chain amino acid transport system ATP-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (250 aa)    
Predicted Functional Partners:
RPA3295
Possible branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.981
RPA3296
Possible ABC transporter subunit (U75364); Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.974
RPA3294
Putative branched-chain amino acid transport system ATP-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
0.939
RPA3297
Possible branched-chain amino acid transport system substrate-binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
    0.901
RPA1564
Possible urea/short-chain amide transport system substrate-binding protein.
 
    0.829
RPA4021
Putative branched-chain amino acid ABC transport system permease protein livm (liv-I protein m); Belongs to the binding-protein-dependent transport system permease family.
  
 0.814
RPA1231
Possible ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.791
RPA4022
Putative branched-chain amino acid ABC transport system, ATP-binding protein.
  
0.789
ilvM
Putative branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.783
RPA4037
Putative ABC transport system ATP-binding protein.
  
0.774
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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