Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3338Possible Condensation domain, peptide synthetase. (769 aa)    
Predicted Functional Partners:
mcyE
Possible McyE polykeitde synthase and peptide synthetase (AF183408).
  
0.995
RPA3340
Peptide synthetase (fragment).
  
 0.995
RPA3336
Possible lipopeptide antibiotics iturin a biosynthesis protein; Belongs to the P-Pant transferase superfamily.
 
 
 0.982
RPA3778
Putative cytochrome p450-like enzyme.
 
 
 0.937
RPA0421
Possible cytochrome P450 hydroxylase superfamily proteins.
 
 
 0.931
RPA1009
Possible cytochrome P450; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the cytochrome P450 family.
 
 
 0.924
RPA0785
Possible cytochrome P450 family proteins; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.923
RPA1732
Possible cytochrome P450; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the cytochrome P450 family.
 
 
 0.923
cyp199a2
Putative cytochrome P450; The oxidative demethylation of 4-methoxybenzoate requires the participation of the monooxygenase CYP199A2, the ferredoxin-like protein ThcC/RPA1872 and a ferredoxin reductase to mediate the transfer of electrons from NADH to CYP199A2. It is also active with 4- ethylbenzoate.
 
 
 0.918
RPA1613
Putative cytochrome P-450; Belongs to the cytochrome P450 family.
  
 
 0.898
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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