Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3357Putative glycosyltransferase. (224 aa)    
Predicted Functional Partners:
RPA3355
Putative exopolysaccharide polymerization protein.
 
  
 0.959
RPA4583
Possible UDP-N-acetyl-D-mannosamine transferase; Belongs to the glycosyltransferase 26 family.
   
 0.947
manC,
Putative mannose-1-phosphate guanylyltransferase (GDP) (GDP-mannose pyrophosphorylase) (GMP); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.927
RPA4585
Lipopolysaccharide biosynthesis.
 
  
 0.911
RPA2752
Possible succinoglycan biosynthesis transport protein exoP.
 
  
 0.894
RPA4833
Possible polysaccharide export protein.
 
  
 0.837
RPA3983
Putative nucleotide sugar epimerase/dehydratase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.813
RPA3950
Possible glycosyl transferases; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.802
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.784
RPA3348
Possible polysaccharide export protein (AF040104).
 
  
 0.762
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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