STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA3380Response regulator receiver (CheY-like protein). (181 aa)    
Predicted Functional Partners:
RPA3381
Hpt domain.
 
    0.962
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
 
 
0.894
RPA1858
Sensor histidine kinase with a PAS domain.
 
 
 0.850
RPA4140
Sensor histidine kinase with a PAS domain.
 
 
 0.777
RPA1938
Sensor histidine kinase, possible pleC.
 
 
 0.771
RPA1972
Sensor histidine kinase.
 
 
 
 0.768
RPA1556
Phosphotransfer protein with response regulator receiver and Hpt domains.
 
 
 0.739
RPA3133
Response regulator receiver (CheY-like protein).
  
    0.736
RPA3891
Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.735
RPA4753
Histidine kinase with a response regulator receiver domain.
 
 
 0.732
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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