Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3383Possible taurine transport system permease protein. (261 aa)    
Predicted Functional Partners:
RPA3384
Possible ABC related periplasmic binding protein.
 
 
 0.969
nrtC2
Putative nitrate transport system ATP-binding protein.
 
 
 0.964
RPA1364
Sulfate ester transport system ATP-binding protein.
 
 
 0.883
RPA2679
Putative transport system ATP-binding protein.
 
 
 0.879
RPA2677
Putative substrate-binding protein, subunit of ABC transporter.
 
 
 0.878
RPA4163
Putative taurine transport system ATP-binding protein.
 
 
 0.877
RPA0883
ABC transporter, ATP-binding protein.
 
 
 0.870
RPA2497
Putative anion ABC transporter, ATP-binding protein.
 
 
 0.862
RPA2622
Putative sulfonate transport system, ATP-binding protein. Subunit of ABC transporter; Citation: Beil et al. (1995) Eur. J. Biochem. 229:385-394.
 
 
 0.859
RPA2633
Putative ATP-binding protein of ABC transporter, possibly for nitrate.
 
 
 0.853
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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