Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nrtC2Putative nitrate transport system ATP-binding protein. (278 aa)    
Predicted Functional Partners:
RPA3384
Possible ABC related periplasmic binding protein.
 
 0.994
RPA3383
Possible taurine transport system permease protein.
 
 
 0.964
oppD
Putative oligopeptide ABC transporter (ATP-binding protein); Belongs to the ABC transporter superfamily.
 
   
0.809
cysT
Putative sulfate ABC transporter, permease component; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    0.793
RPA2678
Putative permease protein, subunit of ABC transporter.
 
 
 0.774
RPA4162
Putative taurine ABC transport system permease protein.
 
 0.768
nrtA
Putative nitrate transporter component, nrtA; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.722
RPA0755
Putative oligopeptide ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
    
0.717
RPA1363
Sulfate ester transport system permease protein.
 
 
 0.704
cysW
Possible sulfate ABC transporter, permease component.
    
 0.701
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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