Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3414Putative hydroxamate-type ferrisiderophore receptor. (753 aa)    
Predicted Functional Partners:
RPA1339
RNA polymerase ECF-type sigma factor, possible FecI; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.827
RPA3413
Uncharacterized iron-regulated membrane protein DUF337.
 
   
 0.786
RPA1335
Probable FecR, iron siderophore sensor protein.
 
  
 0.752
RPA3281
Probable FecR, iron siderophore sensor protein.
 
  
 0.747
RPA1340
Probable FecR, iron siderophore sensor protein.
 
  
 0.746
fecR3
Probable FecR, iron siderophore sensor protein.
 
  
 0.742
fecR4
Probable FecR, iron siderophore sensor protein.
 
  
 0.729
RPA1345
Conserved hypothetical protein.
 
 
 0.712
RPA1333
Conserved hypothetical protein; InterPro IPR001687.
 
 
 0.697
RPA1338
Conserved hypothetical protein.
 
 
 0.697
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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