Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
emrB1Putative multidrug resistance protein B (drug efflux transporter); Belongs to the major facilitator superfamily. (530 aa)    
Predicted Functional Partners:
RPA3543
Possible multidrug resistance efflux pump.
 
 0.954
rmrA
Putative hlyD family multidrug secretion protein; Citation: Gonzalez-Pasayo and Martinez-Romero (2000) Mol. Plant Microbe Interact. 13:572-577.
 
 0.878
RPA0515
Possible efflux pump protein FarA.
 
 0.865
emrA
Putative multidrug resistance protein.
 
 
 0.864
RPA3540
Putative cell filamentation protein.
  
    0.623
RPA3541
Hypothetical protein.
       0.623
RPA3544
Transcriptional regulator, TetR family.
 
     0.533
RPA1951
Possible FusE-MFP/HlyD family membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.520
RPA2709
Possible FusE-MFP/HlyD family membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.497
RPA1325
Putative FusE-MFP/HlyD family membrane fusion protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.467
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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