Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RPA3543Possible multidrug resistance efflux pump. (422 aa)    
Predicted Functional Partners:
emrB1
Putative multidrug resistance protein B (drug efflux transporter); Belongs to the major facilitator superfamily.
 
 0.954
rmrB
Putative multidrug efflux pump, Major Facilitator Superfamily (MFS); Citation: Gonzalez-Pasayo and Martinez-Romero (2000) Mol. Plant Microbe Interact. 13:572-577; Belongs to the major facilitator superfamily.
 
 0.873
FarB
Putative efflux pump protein FarB; Belongs to the major facilitator superfamily.
 
 0.862
emrB2
Putative drug efflux pump, Major Facilitator Superfamily (MFS).
 
 
 0.862
RPA3544
Transcriptional regulator, TetR family.
 
  
 0.758
RPA0788
Possible Major Facilitator Superfamily (MFS) efflux pump.
 
 
 0.697
RPA1925
Putative transmembrane protein.
 
 
 0.676
RPA2373
Possible outer membrane protein.
 
 
 0.666
oprN
Putative outer membrane efflux protein OprN precursor.
 
 
 0.662
RPA2572
Possible outer membrane efflux protein.
 
 
 0.647
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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