Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3560DUF81. (261 aa)    
Predicted Functional Partners:
sulP
Sulfate transporter family protein.
  
  
 0.759
cysW
Possible sulfate ABC transporter, permease component.
  
  
 0.582
RPA2929
Conserved hypothetical protein.
  
     0.565
arsR3
Transcriptional regulator, ArsR family, ArsR3.
     
 0.543
RPA3558
Possible permease.
  
    0.536
RPA3557
Thiol-disulfide isomerase and thioredoxins.
       0.532
modB
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
     
 0.520
arsC2
Arsenate reductase.
  
    0.454
RPA3561
Transcriptional regulator, ArsR family.
     
 0.447
arsR2
Transcriptional regulator, ArsR family, ArsR2.
     
 0.440
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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