STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA3570Two-component transcriptional regulator, winged helix family. (240 aa)    
Predicted Functional Partners:
RPA3571
Two component sensor histidine kinase.
 
 0.974
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
 
0.956
RPA1558
Sensor histidine kinase with multiple PAS/PAC and a response regulator receiver domain.
 
 0.917
phoR
Two component sensor histidine kinase phoR.
 
 0.882
RPA1681
Sensor histidine kinase with a response regulator receiver domain.
 
0.861
RPA0583
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.846
RPA0494
Sensor histidine kinase with PAS/PAC and Response regulator receiver domains.
 
 
 0.840
nuoCD
NADH-ubiquinone dehydrogenase chain C,D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
 
 0.827
RPA2367
Two component sensor histidine kinase, possible AdeS.
 
 0.802
RPA1858
Sensor histidine kinase with a PAS domain.
 
 0.800
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.