Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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RPA3588Possible FAD-dependent monooxygenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (430 aa)    
Predicted Functional Partners:
RPA1785
Conserved hypothetical protein; Belongs to the UPF0311 family.
 
     0.708
RPA1024
Putative oxidoreductase.
   
    0.655
RPA2785
Possible flavodoxin oxidoreductase.
   
    0.655
RPA3442
Putative cyclase.
 
     0.556
RPA3761
Putative catechol 2,3-dioxygenase.
 
   
 0.551
RPA4198
Amidohydrolase 2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.543
ubiB
Ubiquinone biosynthesis protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.539
RPA3778
Putative cytochrome p450-like enzyme.
 
 
 0.539
fcs2
Putative feruloyl-CoA synthetase.
  
   
 0.519
ubiG
Putative 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
 0.509
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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