STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA3612Conserved hypothetical protein; InterPro IPR000694. (344 aa)    
Predicted Functional Partners:
RPA1325
Putative FusE-MFP/HlyD family membrane fusion protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.523
RPA3543
Possible multidrug resistance efflux pump.
  
 
 0.523
emrA
Putative multidrug resistance protein.
  
 
 0.523
RPA4088
Probable membrane fusion protein (HlyD family of secretion proteins) linked to ABC efflux pumps.
  
 
 0.523
RPA3790
Putative efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.522
rmrA
Putative hlyD family multidrug secretion protein; Citation: Gonzalez-Pasayo and Martinez-Romero (2000) Mol. Plant Microbe Interact. 13:572-577.
  
 
 0.522
RPA0681
Membrane permeases, predicted cation efflux pump; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.521
RPA1648
Membrane permeases, predicted cation efflux pumps; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.521
RPA1951
Possible FusE-MFP/HlyD family membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.521
RPA2709
Possible FusE-MFP/HlyD family membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.521
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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